Package: plsmmLasso 1.1.0
plsmmLasso: Variable Selection and Inference for Partial Semiparametric Linear Mixed-Effects Model
Implements a partial linear semiparametric mixed-effects model (PLSMM) featuring a random intercept and applies a lasso penalty to both the fixed effects and the coefficients associated with the nonlinear function. The model also accommodates interactions between the nonlinear function and a grouping variable, allowing for the capture of group-specific nonlinearities. Nonlinear functions are modeled using a set of bases functions. Estimation is conducted using a penalized Expectation-Maximization algorithm, and the package offers flexibility in choosing between various information criteria for model selection. Post-selection inference is carried out using a debiasing method, while inference on the nonlinear functions employs a bootstrap approach.
Authors:
plsmmLasso_1.1.0.tar.gz
plsmmLasso_1.1.0.zip(r-4.7)plsmmLasso_1.1.0.zip(r-4.6)plsmmLasso_1.1.0.zip(r-4.5)
plsmmLasso_1.1.0.tgz(r-4.6-any)plsmmLasso_1.1.0.tgz(r-4.5-any)
plsmmLasso_1.1.0.tar.gz(r-4.7-any)plsmmLasso_1.1.0.tar.gz(r-4.6-any)
plsmmLasso_1.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
plsmmLasso/json (API)
NEWS
| # Install 'plsmmLasso' in R: |
| install.packages('plsmmLasso', repos = c('https://sami-leon.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/sami-leon/plsmmlasso/issues
Last updated from:07e0178cd0. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 123 | ||
| source / vignettes | OK | 190 | ||
| linux-release-x86_64 | OK | 124 | ||
| macos-release-arm64 | OK | 219 | ||
| macos-oldrel-arm64 | OK | 147 | ||
| windows-devel | OK | 88 | ||
| windows-release | OK | 90 | ||
| windows-oldrel | OK | 98 | ||
| wasm-release | OK | 112 |
Exports:create_basesdebias_plsmmfilter_nonzero_basesplot_fitplsmm_lassosimulate_group_intertest_ftune_plsmm
Dependencies:clicodetoolscpp11dplyrfarverforeachgenericsggplot2glmnetgluegtablehdiisobanditeratorslabelinglarslatticelifecyclelinproglpSolvemagrittrMASSMatrixmvtnormpillarpkgconfigR6RColorBrewerRcppRcppEigenrlangS7scalesscalregshapesurvivaltibbletidyselectutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Generate bases function matrix | create_bases |
| Post-selection inference for PLSMM | debias_plsmm |
| Filter bases functions | filter_nonzero_bases |
| Visualization of estimated mean trajectories and nonlinear functions from a PLSMM | plot_fit |
| Fit a high-dimensional PLSMM | plsmm_lasso |
| Simulate PLSMM | simulate_group_inter |
| Bootstrap joint confidence bands and L2-norm based test on nonlinear functions | test_f |
| Tune Penalized PLSMM | tune_plsmm |
